21966 SLX9
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21966 chr_3 SLX9 1976411 1977521 + SLX9

Synonyms

NCBI ID Ensembl Genomes exon ID
7445369 Thaps21966.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0268
 0.24

Most Highly Correlated Transcripts

bd96

(bd96) eIF-3_zeta
0.9541

21397

Nop52 superfamily
0.9302

bd1876

(bd1876) NatB_MDM20 superfamily
0.9194

6250

reductase
0.9188

33718

Methyltransf_4 superfamily
0.9152

22672

hypothetical protein
0.9118

40341

WD40 superfamily
0.9074

21082

Cupin_8 superfamily
0.9054

39022

COG2319
0.9042

bd1709

(bd1709) NA
0.9031

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SLX9 superfamily Ribosome biogenesis protein SLX9; SLX9 is present in pre-ribosomes from an early stage and is... - 64.1903 1.26E-13 41 - 164 superfamily 259473
SLX9 superfamily Ribosome biogenesis protein SLX9; SLX9 is present in pre-ribosomes from an early stage and is... - 64.1903 1.26E-13 41 - 164 superfamily 259473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 203875 321100 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments