22473 aliphatic_amidase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22473 chr_4 aliphatic_amidase 2175132 2176652 - aliphatic_amidase

Synonyms

NCBI ID Ensembl Genomes exon ID
7451387 Thaps22473.3, Thaps22473.2, Thaps22473.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0105
 0.42

Most Highly Correlated Transcripts

42475

PLN00128
0.9003

bd706

(bd706) NA
0.8931

26991

GRX_GRXh_1_2_like
0.8926

22521

hypothetical protein
0.8868

263810

PTZ00430
0.8829

21239

Cyt_b561_FRRS1_like
0.8739

20405

GRX_GRXh_1_2_like
0.8729

40713

SodA
0.8692

2985

hypothetical protein
0.8683

4502

hypothetical protein
0.8679

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
aliphatic_amidase aliphatic amidases (class 2 nitrilases); Aliphatic amidases catalyze the hydrolysis of short-chain... cl11424 543.034 0 14 - 312 specific 143589
nitrilase superfamily Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes... - 543.034 0 14 - 312 superfamily 264361

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54969 PHATRDRAFT_54969 182516 243542 217668 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006807 GO:0016810 -

GO:0006807

nitrogen compound metabolic process

Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO Category: 
BP

GO:0016810

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Details: 
Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.
GO Category: 
MF

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