23329 groEL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23329 chr_6 groEL 2029308 2031588 - groEL

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps23329.1, Thaps23329.2, Thaps23329.3, Thaps23329.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0063

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0132
 0.41

Most Highly Correlated Transcripts

6610

hypothetical protein
0.9992

bd1652

(bd1652) ABC_ATPase superfamily
0.9261

ThpsCt016

(trnS(uga))
0.9177

bd208

(bd208) DUF3529
0.8882

bd1863

(bd1863) NA
0.8879

bd1380

(bd1380) ycf39
0.8796

bd1403

(bd1403) NA
0.8758

bd1720

(bd1720) ftsH
0.8652

bd997

(bd997) rpoC1
0.8632

bd2028

(bd2028) NA
0.8632

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They... cl02777 693.816 0 6 - 529 specific 239460
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 693.816 0 6 - 529 superfamily 261443
groEL chaperonin GroEL; Reviewed - 590.922 0 6 - 549 multi-dom 237231

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41721 PHATRDRAFT_41721 211084 68535 314748 Not available AT2G28000.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 GO:0003763 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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