23403 ANK
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23403 chr_7 ANK 552252 552865 + ANK

Synonyms

NCBI ID Ensembl Genomes exon ID
7448987 Thaps23403.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0240

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0096
 0.39

Most Highly Correlated Transcripts

4372

hypothetical protein
0.9162

39698

Zn-ribbon_RPA12
0.8781

2332

PTZ00340
0.8756

261893

Ofd1_CTDD
0.8677

269710

NADB_Rossmann superfamily
0.8646

26393

(ubc1) UBCc
0.8537

268443

SAICAR_synt_Sc
0.8482

19158

GRX_PICOT_like
0.8402

269925

AAA_12 superfamily
0.8397

2479

hypothetical protein
0.8359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 80.8906 6.76E-20 20 - 126 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 80.8906 6.76E-20 20 - 126 superfamily 238125
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 64.1995 4.15E-14 22 - 117 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47422 PHATRDRAFT_47422 267759 282375 Not available Not available Not available 323228

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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