2352 ClpSThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2352	chr_2	ClpS	795233	795818	-	ClpS

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446519	Thaps2352.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0024

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0260	0.25	6.6 43

Most Highly Correlated Transcripts

263658 GUN4 0.9047	268480 (GGPS1) Trans_IPPS_HT 0.8969	28125 PLN00203 0.893	261390 NAD_binding_8 superfamily 0.883	261608 PLN02585 0.8781	10809 hypothetical protein 0.8622
9247 hypothetical protein 0.8615	261232 URO-D 0.8594	36235 p450 superfamily 0.8566	8912 hypothetical protein 0.8555

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ClpS		ATP-dependent Clp protease adaptor protein ClpS; In the bacterial cytosol, ATP-dependent protein...	cl00933	74.8195	5.96E-18	103 - 177	specific	251421
ClpS superfamily		ATP-dependent Clp protease adaptor protein ClpS; In the bacterial cytosol, ATP-dependent protein...	-	74.8195	5.96E-18	103 - 177	superfamily	260704

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_bd263	PHATRDRAFT_bd263	222223	169118	455525	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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