261390 NAD_binding_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261390 chr_2 NAD_binding_8 superfamily 1117862 1119638 + NAD_binding_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450370 Thaps261390.3, Thaps261390.2, Thaps261390.1, Thaps261390.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0260
 0.25

Most Highly Correlated Transcripts

574

PRK05444
0.8974

bd1474

(bd1474) phytoene_desat
0.8907

261608

PLN02585
0.8879

bd672

(bd672) NA
0.8837

bd1318

(bd1318) atpF
0.8835

2352

ClpS
0.883

bd1023

(bd1023) atpD
0.8825

268592

VDE superfamily
0.8817

bd598

(bd598) atpG
0.8792

bd258

(bd258) HU
0.877

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 129.038 2.77E-33 72 - 459 superfamily 267487

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10970 PHATRDRAFT_10970 208380 249822 462793 Not available Not available 560104

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004497 GO:0006725 GO:0006118 GO:0008152 GO:0016491 GO:0018658 -

GO:0004497

monooxygenase activity

Details: 
Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
GO Category: 
MF

GO:0006725

cellular aromatic compound metabolic process

Details: 
The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO Category: 
BP

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0018658

salicylate 1-monooxygenase activity

Details: 
Catalysis of the reaction: salicylate + NADH + H+ + O2 = catechol + NAD+ + H2O + CO2.
GO Category: 
MF

Add comment

Log in to post comments