23820 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23820 chr_8 NADB_Rossmann superfamily 914007 915425 - NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449850 Thaps23820.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0014
 0.46

Most Highly Correlated Transcripts

10424

hypothetical protein
0.8295

6630

hypothetical protein
0.8031

261973

PKc_like superfamily
0.8028

21464

BTB
0.7975

264647

p450 superfamily
0.7905

1095

protease_HslV
0.7896

40335

PRK04184
0.7857

20768

hypothetical protein
0.7851

18662

ADK
0.784

7536

hypothetical protein
0.7839

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 140.823 3.93E-39 15 - 329 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 84.4841 2.66E-19 12 - 289 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 100538 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0008708 GO:0008726 GO:0016614 GO:0018446 GO:0018447 GO:0018448 GO:0018449 GO:0018450 GO:0042469 GO:0045703 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008708

NA

Details: 
NA
GO Category: 
NA

GO:0008726

alkanesulfonate monooxygenase activity

Details: 
Catalysis of the reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + sulfite + H2O + FMN.
GO Category: 
MF

GO:0016614

oxidoreductase activity, acting on CH-OH group of donors

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO Category: 
MF

GO:0018446

pinocarveol dehydrogenase activity

Details: 
Catalysis of the reaction: pinocarveol = pinocarvone + 2 H+ + 2 e-.
GO Category: 
MF

GO:0018447

chloral hydrate dehydrogenase activity

Details: 
Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.
GO Category: 
MF

GO:0018448

hydroxymethylmethylsilanediol oxidase activity

Details: 
Catalysis of the reaction: hydroxymethylmethylsilanediol + O2 + 2 H+ + 2 e- = formylmethylsilanediol + 2 H2O.
GO Category: 
MF

GO:0018449

1-phenylethanol dehydrogenase activity

Details: 
Catalysis of the reaction: (S)-1-phenylethanol = acetophenone + H2.
GO Category: 
MF

GO:0018450

myrtenol dehydrogenase activity

Details: 
Catalysis of the reaction: myrtenol + O2 + 2 H+ + 2 e- = 2 H2O + myrtenal.
GO Category: 
MF

GO:0042469

versicolorin reductase activity

Details: 
Catalysis of the reduction of versicolorin A to sterigmatocystin.
GO Category: 
MF

GO:0045703

ketoreductase activity

Details: 
Catalysis of the reduction of a ketone group to form the corresponding alcohol.
GO Category: 
MF

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