40335 PRK04184
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40335 chr_4 PRK04184 1214094 1216481 + PRK04184

Synonyms

NCBI ID Ensembl Genomes exon ID
7447975 Thaps40335.3, Thaps40335.4, Thaps40335.2, Thaps40335.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0465

Most Highly Correlated Transcripts

10487

hypothetical protein
0.9076

12899

AAA
0.9015

21220

KU superfamily
0.8982

6823

COG2 superfamily
0.895

9036

hypothetical protein
0.889

8269

(Tp_CXC1) regulator [Rayko]
0.8873

18530

RNase_HII_bacteria_HII_like
0.8817

1063

hypothetical protein
0.8768

7978

Cation_efflux superfamily
0.869

35798

AAA
0.8688

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TopoIIB_Trans TopoIIB_Trans: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in... cl02783 169.774 2.07E-49 382 - 532 specific 238420
TopoII_MutL_Trans superfamily MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-... - 169.774 2.07E-49 382 - 532 superfamily 261445
PRK04184 DNA topoisomerase VI subunit B; Validated - 436.246 1.66E-145 11 - 552 multi-dom 235246

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15042 PHATRDRAFT_15042 208537 179763 465510 Cre01.g019750.t1.1 AT3G20780.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

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