24080 (Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24080	chr_9	(Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type	1104648	1106340	+	fucoxanthin chl a/c light-harvesting protein, lhcr type

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451002	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0208	0.25	15 20

Most Highly Correlated Transcripts

29375 Chloroa_b-bind 0.998	bd1820 (bd1820) Fasciclin 0.9916	11501 (FCP3) Chloroa_b-bind 0.9868	bd218 (bd218) Chloroa_b-bind superfamily 0.9852	26246 (Lhcr3) fucoxanthin chl a/c light-harvesting protein 0.9844	2601 (Lhca2) Chloroa_b-bind 0.9835
bd1160 (bd1160) Chloroa_b-bind superfamily 0.9829	25402 (Lhcf10) fucoxanthin chl a/c light-harvesting protein, major type 0.9819	34830 MSP superfamily 0.9811	2845 Chloroa_b-bind superfamily 0.9791

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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