2452 DUF1244 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2452	chr_2	DUF1244 superfamily	1044730	1045991	-	DUF1244 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450351	Thaps2452.2, Thaps2452.1, Thaps2452.5, Thaps2452.4, Thaps2452.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0242

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0254	0.29	0.55 55

Most Highly Correlated Transcripts

5295 hypothetical protein 0.8588	40925 (RPB21) PRK08565 0.8565	8159 hypothetical protein 0.8563	22847 hypothetical protein 0.855	262616 (MYB22) 0.8538	35723 HepA 0.8505
21027 hypothetical protein 0.8495	33033 YSH1 0.8421	262858 (IKI3) IKI3 0.8417	12836 EEP superfamily 0.8414

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1244 superfamily		Protein of unknown function (DUF1244); This family consists of several short bacterial proteins of...	-	75.6997	1.19E-17	48 - 176	superfamily	260911

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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