24784 pepsin_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24784 chr_14 pepsin_like 196798 199453 - pepsin_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7450844 Thaps24784.2, Thaps24784.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0176

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9658

bd687

(bd687) NA
0.9158

264023

RabGAP-TBC
0.8862

8762

SNF2_N
0.8691

22092

(COP3) Coatomer_WDAD
0.8685

12836

EEP superfamily
0.8685

24206

COG1835
0.8682

bd1820

(bd1820) Fasciclin
0.8633

11700

START
0.8594

bd719

(bd719) NA
0.8594

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH; Pepsin-... cl11403 92.8735 7.43E-21 157 - 471 specific 133138
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 92.8735 7.43E-21 157 - 471 superfamily 264354

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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