24785 BTB superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24785 chr_14 BTB superfamily 202433 205068 - BTB superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450845 Thaps24785.4, Thaps24785.1, Thaps24785.3, Thaps24785.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0243

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0079
 0.38

Most Highly Correlated Transcripts

32395

RNA_pol
0.8914

269925

AAA_12 superfamily
0.8825

4574

hypothetical protein
0.8716

5104

hypothetical protein
0.8663

23812

TrmA
0.8649

21698

hypothetical protein
0.8613

2392

hypothetical protein
0.8591

19623

RRM3_MEI2_like
0.8578

22965

SrmB
0.8557

23210

hypothetical protein
0.8531

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BTB superfamily BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... - 91.4714 7.30E-22 497 - 580 superfamily 261320

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31975 PHATRDRAFT_31975 162155 192928 213732 Cre10.g434300.t1.1 AT5G63010.1 348556

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005249 GO:0006813 GO:0008076 GO:0016020 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005249

voltage-gated potassium channel activity

Details: 
Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO Category: 
MF

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008076

voltage-gated potassium channel complex

Details: 
A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.
GO Category: 
CC

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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