24863 CASP_CThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24863	chr_14	CASP_C	556659	560088	-	CASP_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452689	Thaps24863.6, Thaps24863.2, Thaps24863.5, Thaps24863.4, Thaps24863.1, Thaps24863.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0197

Most Highly Correlated Transcripts

13448 Sec1 0.8738	16114 PLN02350 0.8698	33094 Sun 0.8682	264556 FBPase 0.8524	268822 hypothetical protein 0.8454	269624 TIM_phosphate_binding superfamily 0.8437
16295 FBPase 0.8402	2124 Pan_kinase superfamily 0.8397	269937 M1_APN_2 0.8386	12899 AAA 0.8372

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CASP_C		CASP C terminal; This domain is the C-terminal region of the CASP family of proteins. It is a Golgi...	-	82.4757	1.67E-17	599 - 750	multi-dom	254645

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44086	PHATR_44086	247116	250576	Not available	Not available	AT3G18480.1	484998

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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