24878 COG0412Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24878	chr_14	COG0412	641613	644382	-	COG0412

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452706	Thaps24878.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0223

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0230	0.24	0.00011 150

Most Highly Correlated Transcripts

261145 Lactamase_B superfamily 0.9292	32395 RNA_pol 0.9272	4372 hypothetical protein 0.9237	262041 MIF4G 0.9225	25139 RRN3 superfamily 0.9221	29705 18S_RNA_Rcl1p 0.92
24217 hypothetical protein 0.9166	23202 RsuA 0.911	268145 PLN00040 0.9084	268812 HrpA 0.9074

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0412		Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and...	-	68.176	7.35E-13	473 - 698	multi-dom	223489

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	248791	320228	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003677 -

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