262041 MIF4G
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262041 chr_4 MIF4G 266464 269724 + MIF4G

Synonyms

NCBI ID Ensembl Genomes exon ID
7442062 Thaps262041.3, Thaps262041.1, Thaps262041.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0223

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0230
 0.24

Most Highly Correlated Transcripts

32395

RNA_pol
0.9556

39540

Alpha_ANH_like_II
0.9507

268596

CBF
0.9463

268598

COG1094
0.9462

268145

PLN00040
0.9353

27873

PLN02274
0.9348

24217

hypothetical protein
0.9314

bd1709

(bd1709) NA
0.9281

6835

DUF947
0.9275

2921

RRM_SF
0.9272

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MIF4G Middle domain of eukaryotic initiation factor 4G (eIF4G); Also occurs in NMD2p and CBP80. The... cl02652 69.3115 2.92E-13 480 - 693 specific 214713
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 69.3115 2.92E-13 480 - 693 superfamily 261392
MA3 superfamily MA3 domain; Domain in DAP-5, eIF4G, MA-3 and other proteins. Highly alpha-helical. May contain... - 62.2621 2.59E-11 797 - 899 superfamily 243129

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40070 PHATRDRAFT_40070 168293 222516 194603 Cre09.g415200.t1.1 AT5G17930.1 322555

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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