25100 PAP_fibrillin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25100 chr_16a PAP_fibrillin superfamily 70051 71284 - PAP_fibrillin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449964 Thaps25100.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0035

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0012
 0.49

Most Highly Correlated Transcripts

bd1840

(bd1840) NA
0.9144

bd690

(bd690) NA
0.9128

bd1934

(bd1934) NA
0.8947

bd415

(bd415) arom_aa_hydroxylase superfamily
0.894

bd1801

(bd1801) NA
0.8845

bd877

(bd877) NA
0.8842

bd1841

(bd1841) CAP10 superfamily
0.883

bd1946

(bd1946) NA
0.8809

bd738

(bd738) NA
0.8804

bd885

(bd885) NA
0.8671

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAP_fibrillin superfamily PAP_fibrillin; This family identifies a conserved region found in a number of plastid lipid-... - 63.289 4.20E-12 169 - 350 superfamily 252780

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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