25656 LactonaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25656	chr_20	Lactonase	550536	553027	+	Lactonase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447754	Thaps25656.4, Thaps25656.3, Thaps25656.1, Thaps25656.2, Thaps25656.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0396

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0046	0.42	0.56 320

Most Highly Correlated Transcripts

4482 hypothetical protein 0.8605	23987 hypothetical protein 0.8592	262157 E1_like_apg7 0.8587	1197 RhaT 0.8535	21411 hypothetical protein 0.846	9364 hypothetical protein 0.8445
24920 hypothetical protein 0.8322	1275 hypothetical protein 0.8319	12084 hypothetical protein 0.8318	24940 CAP10 superfamily 0.8304

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Lactonase		Lactonase, 7-bladed beta-propeller; This entry contains bacterial 6-phosphogluconolactonases (6PGL)...	-	243.664	3.55E-75	52 - 462	multi-dom	255877

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44009	PHATR_44009	212410	68333	440947	Not available	Not available	471538

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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