260744 BioA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260744 chr_1 BioA 65666 67491 + BioA

Synonyms

NCBI ID Ensembl Genomes exon ID
7447633 Thaps260744.1, Thaps260744.2, Thaps260744.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9337

bd687

(bd687) NA
0.8052

bd518

(bd518) p450 superfamily
0.8013

267977

MATE_like superfamily
0.7715

11628

hypothetical protein
0.7614

bd1662

(bd1662) TIGR00367
0.7566

10566

Na_Ca_ex
0.7418

5295

hypothetical protein
0.7354

2452

DUF1244 superfamily
0.7311

35239

CPSF_A
0.7298

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-... cl18945 386.924 1.30E-129 121 - 531 specific 99735
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 386.924 1.30E-129 121 - 531 superfamily 267298
BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] - 523.648 0 120 - 532 multi-dom 223239

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19427 PHATRDRAFT_19427 186183 203334 456336 Not available AT5G57590.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008483 GO:0030170 GO:0004015 GO:0009102 -

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0030170

pyridoxal phosphate binding

Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO Category: 
MF

GO:0004015

adenosylmethionine-8-amino-7-oxononanoate transaminase activity

Details: 
Catalysis of the reaction: 8-amino-7-oxononanoate + S-adenosyl-L-methionine(1+) = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoate.
GO Category: 
MF

GO:0009102

biotin biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.
GO Category: 
BP

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