260866 (ORC2) ORC2 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260866	chr_1	(ORC2) ORC2 superfamily	1008022	1011023	+	ORC2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445649	Thaps260866.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0126

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0080	0.40	0.0016 0.000042

Most Highly Correlated Transcripts

17582 HAD-SF-IIA-hyp3 0.9239	9570 HECTc 0.919	4260 WD40 0.9186	38652 PI-PLCc_eukaryota 0.9185	6693 hypothetical protein 0.9179	264827 S_TKc 0.9167
23740 DUF72 0.9163	261400 NA 0.9155	22507 hypothetical protein 0.9136	8500 PRP38 superfamily 0.9135

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ORC2 superfamily		Origin recognition complex subunit 2; All DNA replication initiation is driven by a single...	-	134.717	2.54E-34	720 - 998	superfamily	252359

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42935	PHATRDRAFT_42935	186231	151813	Not available	Cre03.g199400.t1.1	AT2G37560.2	304265

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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