261176 Hydrolase_4 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261176 chr_1 Hydrolase_4 superfamily 3035330 3037298 + Hydrolase_4 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0020

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0139
 0.40

Most Highly Correlated Transcripts

268863

COG4178
0.8675

261400

NA
0.8631

bd651

(bd651) HMGB-UBF_HMG-box
0.8613

36669

TPT
0.8576

9534

(FGS1) FolC
0.8552

3071

NA
0.8546

5342

hypothetical protein
0.8495

262762

BET4
0.8489

23782

hypothetical protein
0.8472

3924

hypothetical protein
0.8434

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Hydrolase_4 superfamily Putative lysophospholipase; This domain is found in bacteria and eukaryotes and is approximately... - 175.026 1.21E-50 129 - 425 superfamily 267493
Abhydrolase_1 alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes. - 69.4694 7.79E-14 183 - 412 multi-dom 249959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 203411 139692 229690 Cre08.g375600.t1.2 AT2G14260.2 246181

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0004177 GO:0006508 GO:0016804 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004177

aminopeptidase activity

Details: 
Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0016804

NA

Details: 
NA
GO Category: 
NA

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