261278 GRX_GRXh_1_2_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261278	chr_2	GRX_GRXh_1_2_like	556238	557112	-	GRX_GRXh_1_2_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps261278.1, Thaps261278.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0054

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0042	0.43

Most Highly Correlated Transcripts

270295 hypothetical protein 0.9703	40704 WD40 0.9081	1770 hypothetical protein 0.9005	36367 WD40 0.8984	20585 RanBD_family 0.8977	11640 hypothetical protein 0.8976
5942 MinD 0.8937	7886 hypothetical protein 0.8931	24996 hypothetical protein 0.8895	40293 TRX_family 0.8889

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GRX_GRXh_1_2_like		Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins...	cl00388	102.233	1.61E-27	174 - 259	specific	239511
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	102.233	1.61E-27	174 - 259	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0045454 -

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