20585 RanBD_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20585 chr_1 RanBD_family 180171 181823 + RanBD_family

Synonyms

NCBI ID Ensembl Genomes exon ID
7449135 Thaps20585.2, Thaps20585.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0110

Most Highly Correlated Transcripts

16295

FBPase
0.9197

13448

Sec1
0.9115

264598

AAA
0.9076

261278

GRX_GRXh_1_2_like
0.8977

38331

YIP1 superfamily
0.8948

261400

NA
0.8942

37497

cysE
0.8865

264492

Peptidase_C1A
0.8825

41025

HDAC_classI
0.8806

9247

hypothetical protein
0.88

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RanBD_family Ran-binding domain; The RanBD is present in RanBD1, RanBD2, RanBD3, Nuc2, and Nuc50. Most of these... cl17171 66.1553 3.13E-13 388 - 505 specific 241232
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 66.1553 3.13E-13 388 - 505 superfamily 266526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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