1111 GINS_A_psf3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1111 chr_1 GINS_A_psf3 699079 700124 - GINS_A_psf3

Synonyms

NCBI ID Ensembl Genomes exon ID
7445041 Thaps1111.1, Thaps1111.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0292
 0.20

Most Highly Correlated Transcripts

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9918

bd439

(bd439) POLBc_alpha
0.9711

bd950

(bd950) NA
0.96

36441

CYCLIN
0.9581

bd1214

(bd1214) KISc_C_terminal
0.9531

bd1173

(bd1173) S_TKc
0.9463

5263

hypothetical protein
0.9387

4688

hypothetical protein
0.9277

11559

hypothetical protein
0.9255

bd529

(bd529) SNF2_N
0.9253

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GINS_A_psf3 Alpha-helical domain of GINS complex protein Psf3 (partner of Sld5 3); Psf3 is a component of GINS... cl17012 57.6611 6.14E-11 105 - 243 specific 212551
GINS_A superfamily Alpha-helical domain of GINS complex proteins; Sld5, Psf1, Psf2 and Psf3; The GINS complex is... - 57.6611 6.14E-11 105 - 243 superfamily 266497

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32118 PHATRDRAFT_32118 149910 225201 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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