262589 (RM47) RM47, ribosomal protein 47 mitochondrial large ribosomal subunit
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262589 chr_5 (RM47) RM47, ribosomal protein 47 mitochondrial large ribosomal subunit 1610770 1611677 - RM47, ribosomal protein 47 mitochondrial large ribosomal subunit

Synonyms

NCBI ID Ensembl Genomes exon ID
7448169 Thaps262589.1, Thaps262589.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0055

Most Highly Correlated Transcripts

34266

(RM17) rplQ
0.9042

5552

hypothetical protein
0.8813

261470

Transcrip_reg superfamily
0.8673

9462

hypothetical protein
0.8624

34590

nt_trans superfamily
0.8585

5631

(APS4) APS2
0.8555

4022

hypothetical protein
0.8552

5623

COG0637
0.8425

35229

H4
0.8382

261527

RagA_like
0.8369

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_37018 PHATR_37018 165019 304323 58651 Not available AT1G07830.1 288597

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003735 GO:0005761 GO:0006412 -

GO:0003735

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

GO:0005761

mitochondrial ribosome

Details: 
A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.
GO Category: 
CC

GO:0006412

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

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