262674 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262674 chr_5 NADB_Rossmann superfamily 2277410 2278381 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447224 Thaps262674.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0204
 0.18

Most Highly Correlated Transcripts

bd1306

(bd1306) NA
0.9682

bd1645

(bd1645) tpt
0.9669

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9651

bd1820

(bd1820) Fasciclin
0.9604

bd1474

(bd1474) phytoene_desat
0.96

bd1403

(bd1403) NA
0.9507

bd208

(bd208) DUF3529
0.9481

40193

NA
0.943

bd218

(bd218) Chloroa_b-bind superfamily
0.9417

bd1387

(bd1387) psbE
0.9387

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 141.279 7.80E-40 84 - 323 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 110.292 2.89E-28 77 - 283 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_33463 PHATR_33463 267392 323194 441206 Cre16.g675450.t1.2 Not available 555450

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0000252 GO:0000253 GO:0004448 GO:0004495 GO:0008875 GO:0016229 GO:0016616 GO:0018451 GO:0018452 GO:0018453 GO:0048258 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0000252

C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity

Details: 
Catalysis of the reaction: 3-beta-hydroxy-4-beta-methyl-5-alpha-cholesta-8,24-dien-4-alpha-carboxylate + NAD(P)+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + CO2 + NAD(P)H.
GO Category: 
MF

GO:0000253

3-keto sterol reductase activity

Details: 
Catalysis of the reaction: a 3-beta-hydroxyl sterol + NADP+ = a 3-keto sterol + NADPH + H(+).
GO Category: 
MF

GO:0004448

isocitrate dehydrogenase activity

Details: 
Catalysis of the reaction: isocitrate + acceptor = 2-oxoglutarate + CO2 + reduced acceptor.
GO Category: 
MF

GO:0004495

mevaldate reductase activity

Details: 
Catalysis of the reaction: (R)-mevalonate + acceptor = mevaldate + reduced acceptor.
GO Category: 
MF

GO:0008875

gluconate dehydrogenase activity

Details: 
Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.
GO Category: 
MF

GO:0016229

steroid dehydrogenase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.
GO Category: 
MF

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

GO:0018451

epoxide dehydrogenase activity

Details: 
Catalysis of the reaction: ethene oxide + NAD+ + CoA-SH = NADH + H+ + acetyl-CoA.
GO Category: 
MF

GO:0018452

5-exo-hydroxycamphor dehydrogenase activity

Details: 
Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.
GO Category: 
MF

GO:0018453

2-hydroxytetrahydrofuran dehydrogenase activity

Details: 
Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.
GO Category: 
MF

GO:0048258

3-ketoglucose-reductase activity

Details: 
Catalysis of the reaction: NADP+ + 3-dehydro-alpha-D-glucose = NADPH + alpha-D-glucose.
GO Category: 
MF

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