262796 (ACP3) acpP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262796 chr_6 (ACP3) acpP 618919 619174 + acpP

Synonyms

NCBI ID Ensembl Genomes exon ID
7448589 Thaps262796.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0225
 0.26

Most Highly Correlated Transcripts

bd1820

(bd1820) Fasciclin
0.9695

bd1863

(bd1863) NA
0.9537

bd1306

(bd1306) NA
0.9498

bd208

(bd208) DUF3529
0.9453

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9429

bd1387

(bd1387) psbE
0.9392

bd218

(bd218) Chloroa_b-bind superfamily
0.9386

bd624

(bd624) Glyco_transf_34 superfamily
0.9334

bd1765

(bd1765) NA
0.9297

bd1403

(bd1403) NA
0.9271

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
acpP acyl carrier protein; Provisional cl09936 85.6083 2.52E-23 11 - 85 specific 179197
PP-binding superfamily Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached... - 85.6083 2.52E-23 11 - 85 superfamily 263928

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9709 PHATRDRAFT_9709 263929 Not available 444042 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000036 GO:0006633 GO:0031177 GO:0048037 -

GO:0000036

ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process

Details: 
Interacting selectively and non-covalently with the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP) as part of the process of fatty acid biosynthesis.
GO Category: 
MF

GO:0006633

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

GO:0031177

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

GO:0048037

cofactor binding

Details: 
Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
GO Category: 
MF

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