263403 YafJ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263403 chr_8 YafJ 696872 697974 - YafJ

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0095
 0.37

Most Highly Correlated Transcripts

8711

hypothetical protein
0.8929

10873

NA
0.8835

33039

SpoT
0.8823

261430

Aa_trans superfamily
0.8729

9860

hypothetical protein
0.871

262120

ABC_ATPase superfamily
0.8672

7299

hypothetical protein
0.8632

7924

hypothetical protein
0.8616

21655

hypothetical protein
0.8607

4358

hypothetical protein
0.858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like... cl00319 195.3 4.96E-61 1 - 256 specific 238889
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 195.3 4.96E-61 1 - 256 superfamily 260351
GATase_2 Glutamine amidotransferases class-II; Glutamine amidotransferases class-II. - 100.097 1.92E-25 7 - 166 multi-dom 249761

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 187868 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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