264925 Flavodoxin_1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264925 chr_23 Flavodoxin_1 371640 372187 + Flavodoxin_1

Synonyms

NCBI ID Ensembl Genomes exon ID
7442681 Thaps264925.2, Thaps264925.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0032

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0231
 0.32

Most Highly Correlated Transcripts

plastid_psb28

0.9362

263007

hypothetical protein
0.8493

34551

60KD_IMP
0.8385

5785

hypothetical protein
0.8294

36656

DUF4336
0.8284

2270

hypothetical protein
0.8228

11474

hypothetical protein
0.8194

37585

MECDP_synthase
0.8183

264361

pepN
0.8151

33000

FTHFS
0.8121

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 73.5745 4.42E-17 10 - 145 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 73.5745 4.42E-17 10 - 145 superfamily 260423

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49829 PHATRDRAFT_49829 153944 185310 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0010181 GO:0016491 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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