34551 60KD_IMPThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
34551	chr_5	60KD_IMP	208109	209571	-	60KD_IMP

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps34551.2, Thaps34551.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0016

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0160	0.28	0.29 0.56

Most Highly Correlated Transcripts

22546 hypothetical protein 0.9846	270323 hypothetical protein 0.954	270253 (NTT8) hypothetical protein 0.9356	ThpsCp053 (psbD) photosystem II protein D2 0.9241	ThpsCp001 (psaA) photosystem I P700 chlorophyll a apoprotein A1 0.923	bd1078 (bd1078) NA 0.921
bd1820 (bd1820) Fasciclin 0.9197	bd1765 (bd1765) NA 0.9163	bd1949 (bd1949) NA 0.9127	bd624 (bd624) Glyco_transf_34 superfamily 0.9123

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
60KD_IMP		60Kd inner membrane protein; 60Kd inner membrane protein.	cl00489	198.167	1.22E-60	140 - 352	specific	251083
60KD_IMP superfamily		60Kd inner membrane protein; 60Kd inner membrane protein.	-	198.167	1.22E-60	140 - 352	superfamily	260457

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43657	PHATRDRAFT_43657	211040	243331	416100	Cre17.g729800.t1.2	AT2G28800.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0016021 GO:0051205 -

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