268625 v-snare protein, Vti1 C-terminal half-like protein
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268625	chr_4	v-snare protein, Vti1 C-terminal half-like protein	392587	393424	-	v-snare protein, Vti1 C-terminal half-like protein

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442084	Thaps268625.2, Thaps268625.3, Thaps268625.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0161	0.36	11 400

Most Highly Correlated Transcripts

bd690 (bd690) NA 0.9048	25505 hypothetical protein 0.9043	5340 hypothetical protein 0.904	bd877 (bd877) NA 0.9008	bd737 (bd737) NA 0.898	37934 GRX_PICOT_like 0.8941
bd1801 (bd1801) NA 0.8927	bd738 (bd738) NA 0.8926	20569 NAT_SF 0.8922	9115 DnaJ 0.8844

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43244	PHATRDRAFT_43244	252269	283561	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
SNARE interactions in vesicular transport	map04130

GO Terms

Not available -

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