268775 EMP70 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268775 chr_4 EMP70 superfamily 2076185 2078081 + EMP70 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452221 Thaps268775.2, Thaps268775.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0173

Most Highly Correlated Transcripts

270222

0.9446

40868

EMP70 superfamily
0.9118

24245

hypothetical protein
0.9104

22935

hypothetical protein
0.8783

24735

EMP70
0.878

34876

(COP1) Coatomer_WDAD
0.8736

40496

EMP70 superfamily
0.8655

263997

(APA1) Adaptin_N
0.8632

2328

hypothetical protein
0.8631

21469

hypothetical protein
0.8616

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EMP70 superfamily Endomembrane protein 70; Endomembrane protein 70. - 519.176 1.81E-178 20 - 570 superfamily 251662

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42002 PHATRDRAFT_42002 259111 69760 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

Add comment

Log in to post comments