268867 Peptidase_S28 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268867 chr_5 Peptidase_S28 superfamily 712785 714563 + Peptidase_S28 superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0396
Normalized Mean Residue
Thaps_bicluster_0126
0.34
(OCT1) CoA_trans superfamily
0.9075
(bd1842) NA
0.8941
ADK
0.8931
hypothetical protein
0.8847
RhaT
0.8844
DUF563
0.8839
Abhydrolase_6
0.8824
hypothetical protein
0.8813
hypothetical protein
0.8742
Aa_trans superfamily
0.8716
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_S28 superfamily Serine carboxypeptidase S28; These serine proteases include several eukaryotic enzymes such as... - 199.912 7.14E-59 17 - 390 superfamily 267907
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50463 PHATRDRAFT_50463 207666 321756 354180 Not available Not available 355172
KEGG description KEGG Pathway
Not available Not available
GO:0005509 GO:0005576 GO:0006508 GO:0008236 GO:0008233 GO:0008234 -

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF
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