269573 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269573 chr_11a Peptidase_C1A 622017 623794 + Peptidase_C1A

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0140

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0180
 0.31

Most Highly Correlated Transcripts

bd1839

(bd1839) NA
0.8839

23830

(GCD1) GCD
0.8733

263834

RNR_PFL superfamily
0.8728

bd1841

(bd1841) CAP10 superfamily
0.8724

263836

Ggt
0.8654

bd1756

(bd1756) NA
0.8615

bd1941

(bd1941) NA
0.8609

29322

AAT_I superfamily
0.8552

bd410

(bd410) HNHc
0.8531

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8521

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 224.425 4.50E-71 160 - 378 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 224.425 4.50E-71 160 - 378 superfamily 260335
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... cl07031 73.4323 1.80E-16 69 - 127 specific 254690
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 73.4323 1.80E-16 69 - 127 superfamily 263147

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_25433 PHATRDRAFT_25433 183467 69523 Not available Not available AT1G20850.1 Not available

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0004197 GO:0006508 GO:0008234 GO:0005509 GO:0016946 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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