269726 Tryp_SPc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269726 chr_14 Tryp_SPc 114186 115599 - Tryp_SPc

Synonyms

NCBI ID Ensembl Genomes exon ID
7451627 Thaps269726.1, Thaps269726.3, Thaps269726.4, Thaps269726.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0473

Most Highly Correlated Transcripts

38047

RCC1
0.8399

15605

PKc_like superfamily
0.8394

42283

RabGAP-TBC
0.8351

6629

hypothetical protein
0.8225

bd663

(bd663) NA
0.8221

36511

PseudoU_synth superfamily
0.8159

29778

Beach
0.8149

8797

hypothetical protein
0.8115

39955

ARM
0.8081

264312

0.8074

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 183.632 1.59E-55 91 - 364 superfamily 238113
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 183.632 1.59E-55 91 - 364 superfamily 238113
Tryp_SPc Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are... - 180.181 3.38E-54 90 - 361 multi-dom 214473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 GO:0030019 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004263

NA

Details: 
NA
GO Category: 
NA

GO:0030019

NA

Details: 
NA
GO Category: 
NA

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