29778 Beach
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29778 chr_13 Beach 38688 39801 - Beach

Synonyms

NCBI ID Ensembl Genomes exon ID
7448049 Thaps29778.1, Thaps29778.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Most Highly Correlated Transcripts

264276

Vps8 superfamily
0.8915

269503

(Tp_HSF_1e) regulator [Rayko]
0.8886

263483

CHD
0.8837

263610

COG3899
0.8798

263599

COG3899
0.8796

24852

hypothetical protein
0.8795

23130

NT_PAP_TUTase
0.8791

9866

hypothetical protein
0.8785

262858

(IKI3) IKI3
0.8773

261056

(APB3) Adaptin_N
0.8735

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... cl10511 407.784 8.01E-143 1 - 265 specific 100117
Beach superfamily BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... - 407.784 8.01E-143 1 - 265 superfamily 263990

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16408 PHATRDRAFT_16408 210384 189768 72186 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments