270031 MhpC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270031 chr_20 MhpC 359708 361886 + MhpC

Synonyms

NCBI ID Ensembl Genomes exon ID
7443363 Thaps270031.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0117

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

bd690

(bd690) NA
0.9539

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9447

bd1934

(bd1934) NA
0.9269

bd1840

(bd1840) NA
0.9263

bd643

(bd643) NA
0.9136

4108

hypothetical protein
0.9109

bd1841

(bd1841) CAP10 superfamily
0.9041

bd737

(bd737) NA
0.8916

bd410

(bd410) HNHc
0.8899

bd1756

(bd1756) NA
0.8842

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function... - 76.2051 6.50E-16 100 - 387 multi-dom 223669

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

Add comment

Log in to post comments