270242 (PsbM) photosystem II reaction center M protein, plastid precursor
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
270242	chr_3	(PsbM) photosystem II reaction center M protein, plastid precursor	1550354	1551422	-	photosystem II reaction center M protein, plastid precursor

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449510	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0225	0.26	0.0012 59000

Most Highly Correlated Transcripts

bd218 (bd218) Chloroa_b-bind superfamily 0.9869	2845 Chloroa_b-bind superfamily 0.9855	bd1820 (bd1820) Fasciclin 0.9807	34830 MSP superfamily 0.9769	20965 hypothetical protein 0.976	29375 Chloroa_b-bind 0.9687
bd1160 (bd1160) Chloroa_b-bind superfamily 0.9635	29842 Rieske_2 0.9559	4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 0.9551	24080 (Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type 0.9527

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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