30919 Longin
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
30919 chr_1 Longin 2863578 2864437 + Longin
NCBI ID Ensembl Genomes exon ID
7452574 Thaps30919.1, Thaps30919.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0077
Normalized Mean Residue
Thaps_bicluster_0086
0.47
(ARF1) Ras_like_GTPase superfamily
0.8696
MgtE superfamily
0.8467
hypothetical protein
0.8431
VTC1
0.8313
Tryp_SPc
0.8299
hypothetical protein
0.828
FtsZ_type1
0.826
Abhydrolase_5
0.8244
(Tp_CBF/NF2) H4 superfamily
0.8221
EFh
0.8214
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Longin superfamily Regulated-SNARE-like domain; Longin is one of the approximately 26 components required for... - 91.8522 5.33E-24 35 - 124 superfamily 258059
Longin superfamily Regulated-SNARE-like domain; Longin is one of the approximately 26 components required for... - 91.8522 5.33E-24 35 - 124 superfamily 258059
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 58.7048 5.66E-12 137 - 196 superfamily 250253
Synaptobrevin superfamily Synaptobrevin; Synaptobrevin. - 58.7048 5.66E-12 137 - 196 superfamily 250253
SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion] - 93.262 2.20E-23 5 - 200 multi-dom 227472
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54066 PHATRDRAFT_54066 178992 196307 236388 Cre12.g554700.t1.2 AT1G11890.1 529447
KEGG description KEGG Pathway
Phagosome map04145
GO:0016021 GO:0016192 -

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

vesicle-mediated transport

Details: 
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO Category: 
BP
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