31465 Brix
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31465 chr_1 Brix 1149570 1150737 - Brix

Synonyms

NCBI ID Ensembl Genomes exon ID
7446836 Thaps31465.2, Thaps31465.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0276
 0.21

Most Highly Correlated Transcripts

21725

Brix superfamily
0.9604

bd1667

(bd1667) Mpp10
0.9566

32807

DEADc
0.945

36406

Ribosomal_L7_archeal_euk
0.944

34959

DUS_like_FMN
0.9419

bd1709

(bd1709) NA
0.9415

21553

Nop16 superfamily
0.9361

40509

(RL30) Ribosomal_L24e_L24
0.9286

18198

RRM_NIFK_like
0.9265

28755

NSA2
0.9251

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Brix Brix domain; Brix domain. cl00935 149.339 2.33E-43 125 - 312 specific 252591
Brix superfamily Brix domain; Brix domain. - 149.339 2.33E-43 125 - 312 superfamily 260706

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
bd524 PHATRDRAFT_12679 PHATRDRAFT_12679 268933 303442 78600 Cre04.g218850.t1.2 AT4G01560.1 354905

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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