31983 Chloroa_b-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31983 chr_2 Chloroa_b-bind superfamily 761625 762389 - Chloroa_b-bind superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps31983.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0129
 0.19

Most Highly Correlated Transcripts

31983

Chloroa_b-bind superfamily
1

bd218

(bd218) Chloroa_b-bind superfamily
0.9935

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9809

2356

hypothetical protein
0.9753

bd1820

(bd1820) Fasciclin
0.971

38494

PLN00120
0.9649

260392

(Lhcf2) fucoxanthin chlorophyll a/c protein 2
0.9633

38583

(Lhcf1) PLN00120
0.9614

31749

Chloroa_b-bind superfamily
0.961

33018

(Lhcf6) PLN00120
0.9598

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 117.862 4.65E-32 1 - 243 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 270606 301726 413829 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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