33220 (MSA1) PMSR superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33220 chr_3 (MSA1) PMSR superfamily 1771951 1773153 - PMSR superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449556 Thaps33220.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0280

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0182
 0.48

Most Highly Correlated Transcripts

bd298

(bd298) ABM superfamily
0.8039

25047

hypothetical protein
0.7761

3776

CIA30 superfamily
0.7438

bd1150

(bd1150) PLN02433
0.7417

31851

BKR_SDR_c
0.7379

270222

0.7348

bd1821

(bd1821) NA
0.7221

bd793

(bd793) NA
0.7172

25062

PA superfamily
0.7166

269624

TIM_phosphate_binding superfamily
0.7125

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PMSR superfamily Peptide methionine sulfoxide reductase; This enzyme repairs damaged proteins. Methionine sulfoxide... - 276.752 2.37E-91 147 - 352 superfamily 260385

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 272267 209843 432420 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0006464 GO:0008113 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0008113

peptide-methionine (S)-S-oxide reductase activity

Details: 
Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.
GO Category: 
MF

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