34125 CdCA1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34125 chr_5 CdCA1 498252 499538 + CdCA1

Synonyms

NCBI ID Ensembl Genomes exon ID
7449703 Thaps34125.1, Thaps34125.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9205

6528

hypothetical protein
0.9134

2078

hypothetical protein
0.8429

ThpsCp022

(psaE) photosystem I subunit IV
0.8041

264181

hypothetical protein
0.801

6529

hypothetical protein
0.7916

3553

hypothetical protein
0.7913

bd1806

(bd1806) AAT_I superfamily
0.7906

10229

hypothetical protein
0.7778

6771

HMGB-UBF_HMG-box
0.776

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CdCA1 superfamily Cadmium carbonic anhydrase repeat; This domain is the cadmium carbonic anhydrase repeat unit of the... - 256.19 4.22E-84 123 - 330 superfamily 256061
CdCA1 superfamily Cadmium carbonic anhydrase repeat; This domain is the cadmium carbonic anhydrase repeat unit of the... - 256.19 4.22E-84 123 - 330 superfamily 256061

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 228976 200408 436031 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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