11643 (Tp_AP2-EREBP3) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11643 chr_20 (Tp_AP2-EREBP3) regulator [Rayko] 754002 755407 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7447788 Thaps11643.1, Thaps11643.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0155
 0.30

Most Highly Correlated Transcripts

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9691

bd439

(bd439) POLBc_alpha
0.9666

bd1214

(bd1214) KISc_C_terminal
0.9576

bd843

(bd843) NA
0.9466

36441

CYCLIN
0.9398

bd950

(bd950) NA
0.9387

bd529

(bd529) SNF2_N
0.9382

4041

HEC1
0.9365

5867

CDC6
0.9306

5263

hypothetical protein
0.9237

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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