35808 SOULThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35808	chr_8	SOUL	820345	821130	+	SOUL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452843	Thaps35808.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0138

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0013	0.47	0.036 65

Most Highly Correlated Transcripts

21434 AAA_26 0.892	5582 hypothetical protein 0.8916	2732 Cyclophilin_PPIL3_like 0.8883	31979 ENDO3c 0.8881	5921 hypothetical protein 0.8847	10474 hypothetical protein 0.8824
9174 DUF563 0.8817	1000 hypothetical protein 0.8797	2862 HA 0.8796	2148 DUF1826 superfamily 0.8788

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	155.877	6.73E-47	9 - 202	superfamily	252825
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	155.877	6.73E-47	9 - 202	superfamily	252825

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_46002	PHATRDRAFT_46002	268116	318615	75645	Cre13.g566850.t1.2	AT2G37970.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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