36476 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36476 chr_10 WD40 superfamily 386896 388125 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445860 Thaps36476.1, Thaps36476.3, Thaps36476.2, Thaps36476.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0244

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9552

19158

GRX_PICOT_like
0.9393

33995

DUF1077
0.9332

37100

Zn-ribbon_RPC11
0.9299

1175

hypothetical protein
0.9272

24619

2-Hacid_dh_1
0.9235

24790

Nitro_FMN_reductase superfamily
0.9228

1676

hypothetical protein
0.9218

36007

Aldolase_II superfamily
0.9214

267979

HCO3_cotransp superfamily
0.917

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 105.495 2.21E-26 13 - 323 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 76.6659 7.63E-16 18 - 323 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23315 PHATRDRAFT_28743 PHATRDRAFT_28743 259917 326131 76541 Not available AT5G14530.1 248512

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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