36525 PRK09427
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36525 chr_10 PRK09427 754110 755985 - PRK09427

Synonyms

NCBI ID Ensembl Genomes exon ID
7450734 Thaps36525.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0050

Most Highly Correlated Transcripts

55

hypothetical protein
0.9125

37628

Ribosomal_L7Ae
0.9121

21939

Aldo_ket_red
0.9107

15142

PT_UbiA_Cox10
0.9099

269448

MATE_DinF_like
0.9096

22770

PLN02908
0.9093

4604

hypothetical protein
0.905

268068

PTZ00401
0.9041

22996

Ntn_hydrolase superfamily
0.9029

40293

TRX_family
0.9016

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway,... cl17186 258.548 1.08E-81 99 - 341 specific 238203
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 205.886 5.13E-62 366 - 610 superfamily 266538
PRAI Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan... cl17186 205.886 5.13E-62 366 - 610 specific 238237
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 205.886 5.13E-62 366 - 610 superfamily 266538
PRK09427 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Provisional - 277.466 8.59E-86 88 - 609 multi-dom 236509

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34747 PHATRDRAFT_34747 179168 302742 245556 Cre13.g602350.t1.2 AT5G48220.2 551390

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004640 GO:0006568 -

GO:0004640

phosphoribosylanthranilate isomerase activity

Details: 
Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.
GO Category: 
MF

GO:0006568

tryptophan metabolic process

Details: 
The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
GO Category: 
BP

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