36669 TPTThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36669	chr_11a	TPT	436212	437714	-	TPT

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps36669.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0033

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0239	0.34	160 920

Most Highly Correlated Transcripts

36669 TPT 1	4465 hypothetical protein 0.9657	4292 hypothetical protein 0.9377	1219 PAP_fibrillin superfamily 0.9349	268773 Gst 0.9301	21957 PAP_fibrillin superfamily 0.9288
6594 hypothetical protein 0.9279	2211 hypothetical protein 0.9276	23001 hypothetical protein 0.9274	937 Methyltransf_21 superfamily 0.925

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPT superfamily		Triose-phosphate Transporter family; This family includes transporters with a specificity for...	-	86.07	7.41E-20	339 - 493	superfamily	251760
TPT superfamily		Triose-phosphate Transporter family; This family includes transporters with a specificity for...	-	86.07	7.41E-20	339 - 493	superfamily	251760

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	464105	Not available	Not available	331759

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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