36911 Rhomboid
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36911 chr_12 Rhomboid 70994 72870 - Rhomboid

Synonyms

NCBI ID Ensembl Genomes exon ID
7443226 Thaps36911.2, Thaps36911.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0092

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0221
 0.14

Most Highly Correlated Transcripts

11130

hypothetical protein
0.9806

3482

hypothetical protein
0.9774

1055

hypothetical protein
0.9727

10180

hypothetical protein
0.9723

7192

hypothetical protein
0.9718

bd765

(bd765) NA
0.9696

4147

hypothetical protein
0.9691

6774

hypothetical protein
0.9685

bd1173

(bd1173) S_TKc
0.9676

261036

PLN03150
0.967

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rhomboid Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... cl11446 137.355 5.13E-38 310 - 457 specific 250801
Rhomboid superfamily Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... - 137.355 5.13E-38 310 - 457 superfamily 264372

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42743 PHATRDRAFT_42743 227230 202464 449194 Not available AT5G07250.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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