38085 tpt
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38085 chr_18 tpt 362829 363842 - tpt

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps38085.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

38085

tpt
1

270230

(Trx-f) thioredoxin f
0.9808

bd1645

(bd1645) tpt
0.9771

bd1306

(bd1306) NA
0.9767

ThpsCp069

(cbbX) CbbX
0.9563

bd718

(bd718) PRK10387
0.9559

bd1820

(bd1820) Fasciclin
0.9524

ThpsCp071

(ycf41) hypothetical protein
0.9432

bd1387

(bd1387) psbE
0.9425

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9419

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 93.774 2.25E-23 178 - 327 superfamily 251760
TPT superfamily Triose-phosphate Transporter family; This family includes transporters with a specificity for... - 93.774 2.25E-23 178 - 327 superfamily 251760
tpt Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT)... - 238.857 2.74E-76 32 - 337 multi-dom 129898

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41733 PHATRDRAFT_54017 PHATRDRAFT_54017 213422 251424 352050 Not available AT5G54800.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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