38194 MPP_PhoA_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38194 chr_18 MPP_PhoA_N 282192 284596 - MPP_PhoA_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7444247 Thaps38194.3, Thaps38194.4, Thaps38194.1, Thaps38194.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0266

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

bd1949

(bd1949) NA
0.8973

bd446

(bd446) HrpA
0.8868

bd208

(bd208) DUF3529
0.8767

bd687

(bd687) NA
0.8573

bd624

(bd624) Glyco_transf_34 superfamily
0.8535

bd1820

(bd1820) Fasciclin
0.8511

bd392

(bd392) DEXDc
0.85

bd1078

(bd1078) NA
0.8491

bd1765

(bd1765) NA
0.8374

bd1869

(bd1869) SET
0.8318

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain... cl13995 371.286 1.03E-122 23 - 344 specific 163669
MPP_superfamily superfamily metallophosphatase superfamily, metallophosphatase domain; Metallophosphatases (MPPs), also known... - 371.286 1.03E-122 23 - 344 superfamily 265413
5_nucleotid_C superfamily 5'-nucleotidase, C-terminal domain; 5'-nucleotidase, C-terminal domain. - 121.224 8.95E-32 385 - 564 superfamily 251581
5_nucleotid_C superfamily 5'-nucleotidase, C-terminal domain; 5'-nucleotidase, C-terminal domain. - 121.224 8.95E-32 385 - 564 superfamily 251581
UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [... - 139.134 3.13E-35 1 - 564 multi-dom 223808

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009166 GO:0016787 GO:0008253 GO:0017175 -

GO:0009166

nucleotide catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).
GO Category: 
BP

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0008253

5'-nucleotidase activity

Details: 
Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate.
GO Category: 
MF

GO:0017175

NA

Details: 
NA
GO Category: 
NA

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